STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001947annotation not available (288 aa)    
Predicted Functional Partners:
APOA1
Apolipoprotein A1.
     
  0.947
ENSCAPP00000006655
annotation not available
     
 0.945
PLTP
Phospholipid transfer protein.
    
 0.928
ENSCAPP00000006828
annotation not available
     
 0.925
ENSCAPP00000015384
annotation not available
     
 0.925
ENSCAPP00000001033
annotation not available
     
 0.924
CLU
Clusterin.
     
 0.924
APOM
Apolipoprotein M.
     
 0.918
PON1
Paraoxonase 1.
     
 0.916
APOC2
Apolipoprotein C2.
     
 0.915
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.