PTPRE protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

PTPRE

Protein tyrosine phosphatase receptor type E. (602 aa)

Predicted Functional Partners:

GRB2

0.828

IL1RAP

0.782

ENSCAPP00000005824

0.740

SLITRK2

0.720

ENSCAPP00000000757

0.715

NTRK2

0.715

PTK7

0.715

ENSCAPP00000016030

0.715

NTRK1

0.715

LRIT3

0.707

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000000757	ENSCAPP00000005824	ENSCAPP00000000757	ENSCAPP00000005824	annotation not available	annotation not available	0.405
ENSCAPP00000000757	ENSCAPP00000016030	ENSCAPP00000000757	ENSCAPP00000016030	annotation not available	annotation not available	0.520
ENSCAPP00000000757	GRB2	ENSCAPP00000000757	ENSCAPP00000011245	annotation not available	Growth factor receptor bound protein 2.	0.926
ENSCAPP00000000757	LRIT3	ENSCAPP00000000757	ENSCAPP00000000655	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.593
ENSCAPP00000000757	NTRK2	ENSCAPP00000000757	ENSCAPP00000011810	annotation not available	Neurotrophic receptor tyrosine kinase 2.	0.602
ENSCAPP00000000757	PTPRE	ENSCAPP00000000757	ENSCAPP00000001970	annotation not available	Protein tyrosine phosphatase receptor type E.	0.715
ENSCAPP00000005824	ENSCAPP00000000757	ENSCAPP00000005824	ENSCAPP00000000757	annotation not available	annotation not available	0.405
ENSCAPP00000005824	ENSCAPP00000016030	ENSCAPP00000005824	ENSCAPP00000016030	annotation not available	annotation not available	0.405
ENSCAPP00000005824	PTK7	ENSCAPP00000005824	ENSCAPP00000012661	annotation not available	Protein tyrosine kinase 7 (inactive).	0.706
ENSCAPP00000005824	PTPRE	ENSCAPP00000005824	ENSCAPP00000001970	annotation not available	Protein tyrosine phosphatase receptor type E.	0.740
ENSCAPP00000005824	SLITRK2	ENSCAPP00000005824	ENSCAPP00000010462	annotation not available	SLIT and NTRK like family member 2.	0.680
ENSCAPP00000016030	ENSCAPP00000000757	ENSCAPP00000016030	ENSCAPP00000000757	annotation not available	annotation not available	0.520
ENSCAPP00000016030	ENSCAPP00000005824	ENSCAPP00000016030	ENSCAPP00000005824	annotation not available	annotation not available	0.405
ENSCAPP00000016030	GRB2	ENSCAPP00000016030	ENSCAPP00000011245	annotation not available	Growth factor receptor bound protein 2.	0.926
ENSCAPP00000016030	LRIT3	ENSCAPP00000016030	ENSCAPP00000000655	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.593
ENSCAPP00000016030	NTRK2	ENSCAPP00000016030	ENSCAPP00000011810	annotation not available	Neurotrophic receptor tyrosine kinase 2.	0.605
ENSCAPP00000016030	PTPRE	ENSCAPP00000016030	ENSCAPP00000001970	annotation not available	Protein tyrosine phosphatase receptor type E.	0.715
GRB2	ENSCAPP00000000757	ENSCAPP00000011245	ENSCAPP00000000757	Growth factor receptor bound protein 2.	annotation not available	0.926
GRB2	ENSCAPP00000016030	ENSCAPP00000011245	ENSCAPP00000016030	Growth factor receptor bound protein 2.	annotation not available	0.926
GRB2	LRIT3	ENSCAPP00000011245	ENSCAPP00000000655	Growth factor receptor bound protein 2.	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.501