Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD29Ankyrin repeat domain 29. (276 aa)    
Predicted Functional Partners:
ENSCAPP00000000905
annotation not available
    
  0.965
ADD1
Adducin 1.
    
  0.965
ADD3
Adducin 3.
    
  0.965
UBP1
Upstream binding protein 1.
    
   0.957
TFCP2
Transcription factor CP2.
    
   0.957
TFCP2L1
Transcription factor CP2 like 1.
    
   0.838
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.753
SPSB3
splA/ryanodine receptor domain and SOCS box containing 3.
     
 0.667
TMEM241
Transmembrane protein 241.
      
 0.660
MTPN
Myotrophin.
  
 
  0.642
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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