Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001977annotation not available (449 aa)    
Predicted Functional Partners:
ENSCAPP00000006028
annotation not available
   
  0.863
PUS7L
Pseudouridine synthase 7 like.
   
 
 0.668
ENSCAPP00000013692
annotation not available
      
 0.666
SRP72
Signal recognition particle 72.
    
 
 0.650
GTSF1L
Gametocyte specific factor 1 like.
      
 0.647
ENSCAPP00000015303
annotation not available
    
 
 0.600
ENSCAPP00000010468
annotation not available
    
 
 0.583
LARP1
La ribonucleoprotein 1, translational regulator.
    
 
 0.583
FOXN1
Forkhead box N1.
    
  0.580
FOXN4
Forkhead box N4.
    
  0.580
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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