Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM149AFamily with sequence similarity 149 member A. (527 aa)    
Predicted Functional Partners:
TBC1D32
TBC1 domain family member 32.
    
   0.841
CFAP20
Cilia and flagella associated protein 20.
    
   0.840
NEU1
Neuraminidase 1.
  
 0.786
GUSB
Glucuronidase beta.
  
 0.775
NAGA
alpha-N-acetylgalactosaminidase.
   
 
 0.752
ENSCAPP00000015528
annotation not available
     
 0.738
ENSCAPP00000010682
annotation not available
    
 0.689
NADK
NAD kinase.
     
 0.686
PIGZ
Phosphatidylinositol glycan anchor biosynthesis class Z.
     
 0.680
B4GALNT1
beta-1,4-N-acetyl-galactosaminyltransferase 1.
     
 0.672
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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