STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001980annotation not available (363 aa)    
Predicted Functional Partners:
POT1
Protection of telomeres 1.
    
 0.827
ENSCAPP00000000321
annotation not available
    
 0.786
MC1R
Melanocortin 1 receptor.
    
 0.786
HEATR1
HEAT repeat containing 1.
     
  0.717
ENSCAPP00000009980
annotation not available
    
 0.699
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.696
NOP14
NOP14 nucleolar protein.
     
  0.692
NOC4L
Nucleolar complex associated 4 homolog.
     
  0.692
TONSL
Tonsoku like, DNA repair protein.
    
  0.665
NOP9
NOP9 nucleolar protein.
     
  0.656
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.