Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLAMF8SLAM family member 8. (246 aa)    
Predicted Functional Partners:
ENSCAPP00000006421
annotation not available
    
   0.887
SH2D1A
SH2 domain containing 1A.
   
 0.853
ENSCAPP00000010712
annotation not available
   
 0.826
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.686
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.676
ENSCAPP00000017396
annotation not available
   
  
 0.672
NRROS
Negative regulator of reactive oxygen species.
   
 0.671
KLHDC9
Kelch domain containing 9.
      
 0.667
MNAT1
MNAT1 component of CDK activating kinase.
    
 0.667
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.653
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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