STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLAMF8SLAM family member 8. (246 aa)    
Predicted Functional Partners:
APAF1
Apoptotic peptidase activating factor 1.
   
 0.874
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.762
ENSCAPP00000009578
annotation not available
    
 0.748
MUS81
MUS81 structure-specific endonuclease subunit.
    
 0.742
SH2D1A
SH2 domain containing 1A.
   
 0.741
POLD1
DNA polymerase delta 1, catalytic subunit.
   
 0.739
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
  0.710
ENSCAPP00000001161
annotation not available
    
  0.704
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
    
 0.697
LSM10
LSM10, U7 small nuclear RNA associated.
    
 0.697
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.