STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC7A11Solute carrier family 7 member 11. (360 aa)    
Predicted Functional Partners:
ENSCAPP00000002965
annotation not available
   
 0.993
SLC3A1
Solute carrier family 3 member 1.
   
 0.779
ENSCAPP00000009388
annotation not available
    
 
 0.767
KIAA0513
KIAA0513.
   
 0.723
ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
   
 0.723
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
    
 
 0.618
ENSCAPP00000002674
annotation not available
   
 0.610
ENSCAPP00000017451
annotation not available
   
 0.610
NUDT12
Nudix hydrolase 12.
   
  0.591
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 
 0.528
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.