Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPMCarboxypeptidase M. (361 aa)    
Predicted Functional Partners:
CPD
Carboxypeptidase D.
    
   0.876
FRS2
Fibroblast growth factor receptor substrate 2.
     
 0.702
NUP107
Nucleoporin 107.
      
 0.685
YEATS4
YEATS domain containing 4.
      
 0.634
LYZL4
Lysozyme like 4.
      
 0.577
PREP
Prolyl endopeptidase.
      
 0.572
POLR3H
RNA polymerase III subunit H.
    
 0.566
FAP
Fibroblast activation protein alpha.
      
 0.531
GCG
Glucagon.
      
 0.531
GAK
Cyclin G associated kinase.
     
  0.507
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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