Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001994annotation not available (423 aa)    
Predicted Functional Partners:
LPCAT4
Lysophosphatidylcholine acyltransferase 4.
    
 0.883
PAFAH2
Platelet activating factor acetylhydrolase 2.
     
 0.882
ENSCAPP00000016484
annotation not available
  
 
 0.882
PLAAT3
Phospholipase A and acyltransferase 3.
   
  0.876
CEPT1
Choline/ethanolamine phosphotransferase 1.
     
 0.874
CHPT1
Choline phosphotransferase 1.
     
 0.874
LPGAT1
Lysophosphatidylglycerol acyltransferase 1.
     
 0.873
ENSCAPP00000003478
annotation not available
     
 0.872
ENSCAPP00000008520
annotation not available
     
 0.872
ENSCAPP00000012346
annotation not available
     
 0.872
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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