STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERMARDER membrane associated RNA degradation. (521 aa)    
Predicted Functional Partners:
ENSCAPP00000003376
annotation not available
   
 0.997
CCT2
Chaperonin containing TCP1 subunit 2.
   
 0.997
CCT4
Chaperonin containing TCP1 subunit 4.
   
 0.996
BAG3
BCL2 associated athanogene 3.
   
 0.985
ENSCAPP00000000754
annotation not available
   
 0.981
ENSCAPP00000014670
annotation not available
   
 0.981
ENSCAPP00000005325
annotation not available
   
 0.980
ENSCAPP00000013556
annotation not available
   
 0.980
CCT8
Chaperonin containing TCP1 subunit 8.
   
 0.980
CCT8L2
Chaperonin containing TCP1 subunit 8 like 2.
   
 0.980
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.