STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001998annotation not available (405 aa)    
Predicted Functional Partners:
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.991
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.991
ENSCAPP00000014372
annotation not available
 
     0.931
SUN3
Sad1 and UNC84 domain containing 3.
    
 0.912
LMNA
Lamin A/C.
    
 0.912
SUN5
Sad1 and UNC84 domain containing 5.
    
 0.895
CCDC155
Coiled-coil domain containing 155.
    
 0.888
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.884
ENSCAPP00000015390
annotation not available
    
 0.876
ENSCAPP00000008807
annotation not available
 
 0.868
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.