Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002002annotation not available (227 aa)    
Predicted Functional Partners:
MKX
Mohawk homeobox.
    
 
 0.870
NPPA
Natriuretic peptide A.
      
 0.657
ENSCAPP00000012370
annotation not available
    
 0.648
KIF21A
Kinesin family member 21A.
      
 0.580
TSHZ3
Teashirt zinc finger homeobox 3.
    
 0.574
GJA5
Gap junction protein alpha 5.
      
 0.569
ENSCAPP00000000270
annotation not available
    
 
 0.562
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.547
ENSCAPP00000015727
annotation not available
    
 0.536
SRF
Serum response factor.
   
 
 0.528
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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