STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFI30IFI30 lysosomal thiol reductase. (221 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
   0.864
MFF
Mitochondrial fission factor.
    
 
 0.684
MB21D2
Mab-21 domain containing 2.
    
  0.671
MIEF1
Mitochondrial elongation factor 1.
    
  0.671
MAB21L3
Mab-21 like 3.
    
  0.671
C19orf71
Chromosome 19 open reading frame 71.
    
   0.646
ENKUR
Enkurin, TRPC channel interacting protein.
    
   0.646
ENSCAPP00000006888
annotation not available
    
   0.646
C9orf135
Chromosome 9 open reading frame 135.
    
   0.646
ENSCAPP00000011657
annotation not available
    
   0.646
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.