Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
IFI30IFI30 lysosomal thiol reductase. (221 aa)    
Predicted Functional Partners:
DAPK1
Death associated protein kinase 1.
    
   0.838
WDR90
WD repeat domain 90.
    
   0.832
ENSCAPP00000008427
annotation not available
    
   0.797
MB21D2
Mab-21 domain containing 2.
    
  0.703
MIEF1
Mitochondrial elongation factor 1.
    
  0.703
MAB21L3
Mab-21 like 3.
    
  0.703
C9orf135
Chromosome 9 open reading frame 135.
    
   0.677
CFAP77
Cilia and flagella associated protein 77.
    
   0.677
SPACA9
Sperm acrosome associated 9.
    
   0.677
MRPL44
Mitochondrial ribosomal protein L44.
     
 0.631
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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