Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NFXL1Nuclear transcription factor, X-box binding like 1. (777 aa)    
Predicted Functional Partners:
ENSCAPP00000002927
annotation not available
    
   0.898
ENSCAPP00000018676
annotation not available
     
 0.877
UBE3A
Ubiquitin protein ligase E3A.
    
 0.874
ENSCAPP00000001860
annotation not available
    
 
 0.772
PSEN1
Presenilin 1.
     
 0.755
PSEN2
Presenilin 2.
     
  0.755
ENSCAPP00000018483
annotation not available
    
 
 0.696
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
   
   0.694
ENSCAPP00000009223
annotation not available
    
   0.693
FKBP3
FKBP prolyl isomerase 3.
    
   0.691
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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