TXNL4A protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

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[Homology]

Score

TXNL4A

Thioredoxin like 4A. (71 aa)

Predicted Functional Partners:

PRPF8

0.998

ENSCAPP00000009211

0.998

EFTUD2

0.998

PRPF6

0.998

ENSCAPP00000015900

0.998

SNRNP40

0.997

SNRPF

0.996

PRPF31

0.995

ENSCAPP00000001161

0.994

LSM2

0.993

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFTUD2	ENSCAPP00000001161	ENSCAPP00000014264	ENSCAPP00000001161	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.998
EFTUD2	ENSCAPP00000009211	ENSCAPP00000014264	ENSCAPP00000009211	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.999
EFTUD2	ENSCAPP00000015900	ENSCAPP00000014264	ENSCAPP00000015900	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.995
EFTUD2	LSM2	ENSCAPP00000014264	ENSCAPP00000008228	Elongation factor Tu GTP binding domain containing 2.	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
EFTUD2	PRPF31	ENSCAPP00000014264	ENSCAPP00000013115	Elongation factor Tu GTP binding domain containing 2.	pre-mRNA processing factor 31.	0.998
EFTUD2	PRPF6	ENSCAPP00000014264	ENSCAPP00000014812	Elongation factor Tu GTP binding domain containing 2.	pre-mRNA processing factor 6.	0.999
EFTUD2	PRPF8	ENSCAPP00000014264	ENSCAPP00000007640	Elongation factor Tu GTP binding domain containing 2.	pre-mRNA processing factor 8.	0.999
EFTUD2	SNRNP40	ENSCAPP00000014264	ENSCAPP00000018274	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein U5 subunit 40.	0.998
EFTUD2	SNRPF	ENSCAPP00000014264	ENSCAPP00000004768	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein polypeptide F.	0.997
EFTUD2	TXNL4A	ENSCAPP00000014264	ENSCAPP00000002026	Elongation factor Tu GTP binding domain containing 2.	Thioredoxin like 4A.	0.998
ENSCAPP00000001161	EFTUD2	ENSCAPP00000001161	ENSCAPP00000014264	annotation not available	Elongation factor Tu GTP binding domain containing 2.	0.998
ENSCAPP00000001161	ENSCAPP00000009211	ENSCAPP00000001161	ENSCAPP00000009211	annotation not available	annotation not available	0.991
ENSCAPP00000001161	ENSCAPP00000015900	ENSCAPP00000001161	ENSCAPP00000015900	annotation not available	annotation not available	0.993
ENSCAPP00000001161	LSM2	ENSCAPP00000001161	ENSCAPP00000008228	annotation not available	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.996
ENSCAPP00000001161	PRPF31	ENSCAPP00000001161	ENSCAPP00000013115	annotation not available	pre-mRNA processing factor 31.	0.994
ENSCAPP00000001161	PRPF6	ENSCAPP00000001161	ENSCAPP00000014812	annotation not available	pre-mRNA processing factor 6.	0.995
ENSCAPP00000001161	PRPF8	ENSCAPP00000001161	ENSCAPP00000007640	annotation not available	pre-mRNA processing factor 8.	0.996
ENSCAPP00000001161	SNRNP40	ENSCAPP00000001161	ENSCAPP00000018274	annotation not available	Small nuclear ribonucleoprotein U5 subunit 40.	0.994
ENSCAPP00000001161	SNRPF	ENSCAPP00000001161	ENSCAPP00000004768	annotation not available	Small nuclear ribonucleoprotein polypeptide F.	0.999
ENSCAPP00000001161	TXNL4A	ENSCAPP00000001161	ENSCAPP00000002026	annotation not available	Thioredoxin like 4A.	0.994