STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L2HGDHL-2-hydroxyglutarate dehydrogenase. (369 aa)    
Predicted Functional Partners:
CS
Citrate synthase.
  
 
 0.952
ENSCAPP00000004078
annotation not available
    
 0.933
FH
Fumarate hydratase.
    
 0.924
ENSCAPP00000000571
annotation not available
  
 
 0.921
PC
Pyruvate carboxylase.
   
 
 0.918
SUCLG1
succinate-CoA ligase alpha subunit.
    
 0.914
GPD2
Glycerol-3-phosphate dehydrogenase 2.
    
 0.910
GRHPR
Glyoxylate and hydroxypyruvate reductase.
  
 
 0.896
GART
annotation not available
    
 0.895
ENSCAPP00000002101
annotation not available
    
 0.885
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.