STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMUB2Transmembrane and ubiquitin like domain containing 2. (309 aa)    
Predicted Functional Partners:
ERLIN2
ER lipid raft associated 2.
    
 
 0.647
TMUB1
Transmembrane and ubiquitin like domain containing 1.
  
 
 
0.588
STK4
Serine/threonine kinase 4.
    
  0.557
STK3
Serine/threonine kinase 3.
    
  0.557
TMEM259
Transmembrane protein 259.
    
 
 0.500
RNF170
Ring finger protein 170.
    
 
 0.495
RNF185
Ring finger protein 185.
    
 
 0.457
RNF5
Ring finger protein 5.
    
 
 0.457
ACTN1
Actinin alpha 1.
   
 0.424
ACTN2
Actinin alpha 2.
   
 0.424
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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