Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002037annotation not available (369 aa)    
Predicted Functional Partners:
TMCC3
Transmembrane and coiled-coil domain family 3.
   
 
 0.748
ENSCAPP00000000920
annotation not available
      
 0.536
ENSCAPP00000010618
annotation not available
  
 
 
 0.498
APP
Amyloid beta precursor protein.
    
 
 0.472
ENSCAPP00000005321
annotation not available
      
 0.454
ENSCAPP00000010607
annotation not available
  
   0.411
HSPD1
Heat shock protein family D (Hsp60) member 1.
    
   0.408
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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