Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MIPEPMitochondrial intermediate peptidase. (671 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
   0.906
MGME1
Mitochondrial genome maintenance exonuclease 1.
    
   0.886
ARSB
Arylsulfatase B.
    
   0.839
XDH
Xanthine dehydrogenase.
   
   0.806
WDR1
WD repeat domain 1.
    
   0.713
ENSCAPP00000002021
annotation not available
      
 0.707
SDHAF4
Succinate dehydrogenase complex assembly factor 4.
    
 
 0.661
PITRM1
Pitrilysin metallopeptidase 1.
   
 
 0.651
ENSCAPP00000008920
annotation not available
     
 0.614
DPP3
Dipeptidyl peptidase 3.
   
  
 0.613
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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