STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIPEPMitochondrial intermediate peptidase. (671 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
   0.754
PITRM1
Pitrilysin metallopeptidase 1.
    
 
 0.646
FXN
Frataxin.
   
 
 0.624
COPS3
COP9 signalosome subunit 3.
   
 
  0.622
XPNPEP3
X-prolyl aminopeptidase 3.
   
 
 0.617
COPS4
COP9 signalosome subunit 4.
   
 
  0.607
PMPCA
Peptidase, mitochondrial processing alpha subunit.
   
  
 0.581
DPP3
Dipeptidyl peptidase 3.
   
  
 0.577
ATP23
ATP23 metallopeptidase and ATP synthase assembly factor homolog.
      
 0.570
SUCLA2
succinate-CoA ligase ADP-forming beta subunit.
  
  
 0.566
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.