STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMIZ1Zinc finger MIZ-type containing 1. (1074 aa)    
Predicted Functional Partners:
ZMIZ2
Zinc finger MIZ-type containing 2.
   
    0.845
SUMO1
Small ubiquitin like modifier 1.
    
 0.834
NOTCH1
Notch receptor 1.
   
 0.804
SIRT1
Sirtuin 1.
    
 
 0.787
ENSCAPP00000013457
annotation not available
    
 0.775
NSMCE2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.749
ENSCAPP00000011901
annotation not available
    
 0.683
PCNA
Proliferating cell nuclear antigen.
    
 
 0.643
BARD1
BRCA1 associated RING domain 1.
    
 0.610
RAD18
RAD18 E3 ubiquitin protein ligase.
    
 
 0.609
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.