Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002044annotation not available (48 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.704
ENSCAPP00000009450
annotation not available
     
 0.641
ENSCAPP00000005342
annotation not available
    
 0.595
RBX1
Ring-box 1.
    
 0.595
CRY2
Cryptochrome circadian regulator 2.
    
 0.540
CRY1
Cryptochrome circadian regulator 1.
    
 0.540
KDM6B
Lysine demethylase 6B.
    
 0.528
CUL1
Cullin 1.
    
 0.520
CUL3
Cullin 3.
    
 0.520
CACUL1
CDK2 associated cullin domain 1.
    
 0.520
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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