Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002045annotation not available (1060 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
   
 0.996
AFDN
Afadin, adherens junction formation factor.
   
 0.992
F11R
F11 receptor.
    
 0.984
ENSCAPP00000006814
annotation not available
   
 0.976
ENSCAPP00000015559
annotation not available
   
 0.976
ENSCAPP00000007468
annotation not available
   
 0.964
GJA1
Gap junction protein alpha 1.
    
 0.953
CLDN4
Claudin 4.
   
 0.945
CLDN1
Claudin 1.
    
 0.943
CLDN9
Claudin 9.
   
 0.933
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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