ENSCAPP00000002046 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000002046

annotation not available (508 aa)

Predicted Functional Partners:

ENSCAPP00000009140

0.524

TMC6

0.522

ZNF48

0.520

ENSCAPP00000016641

0.500

BUD23

0.426

IGSF8

0.414

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BUD23	ENSCAPP00000002046	ENSCAPP00000009301	ENSCAPP00000002046	BUD23 rRNA methyltransferase and ribosome maturation factor.	annotation not available	0.426
ENSCAPP00000002046	BUD23	ENSCAPP00000002046	ENSCAPP00000009301	annotation not available	BUD23 rRNA methyltransferase and ribosome maturation factor.	0.426
ENSCAPP00000002046	ENSCAPP00000009140	ENSCAPP00000002046	ENSCAPP00000009140	annotation not available	annotation not available	0.524
ENSCAPP00000002046	ENSCAPP00000016641	ENSCAPP00000002046	ENSCAPP00000016641	annotation not available	annotation not available	0.500
ENSCAPP00000002046	IGSF8	ENSCAPP00000002046	ENSCAPP00000015546	annotation not available	Immunoglobulin superfamily member 8.	0.414
ENSCAPP00000002046	TMC6	ENSCAPP00000002046	ENSCAPP00000005452	annotation not available	Transmembrane channel like 6.	0.522
ENSCAPP00000002046	ZNF48	ENSCAPP00000002046	ENSCAPP00000005927	annotation not available	Zinc finger protein 48.	0.520
ENSCAPP00000009140	ENSCAPP00000002046	ENSCAPP00000009140	ENSCAPP00000002046	annotation not available	annotation not available	0.524
ENSCAPP00000009140	TMC6	ENSCAPP00000009140	ENSCAPP00000005452	annotation not available	Transmembrane channel like 6.	0.523
ENSCAPP00000016641	ENSCAPP00000002046	ENSCAPP00000016641	ENSCAPP00000002046	annotation not available	annotation not available	0.500
IGSF8	ENSCAPP00000002046	ENSCAPP00000015546	ENSCAPP00000002046	Immunoglobulin superfamily member 8.	annotation not available	0.414
TMC6	ENSCAPP00000002046	ENSCAPP00000005452	ENSCAPP00000002046	Transmembrane channel like 6.	annotation not available	0.522
TMC6	ENSCAPP00000009140	ENSCAPP00000005452	ENSCAPP00000009140	Transmembrane channel like 6.	annotation not available	0.523
ZNF48	ENSCAPP00000002046	ENSCAPP00000005927	ENSCAPP00000002046	Zinc finger protein 48.	annotation not available	0.520