NISCH protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NISCH

Nischarin. (1428 aa)

Predicted Functional Partners:

RND2

0.631

ENSCAPP00000006795

0.625

ITGB1

0.599

MAPK3

0.588

PIK3R1

0.587

RND1

0.585

LIMK1

0.581

ENSCAPP00000003122

0.576

RAB14

0.574

EPOR

0.551

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000003122	ENSCAPP00000006795	ENSCAPP00000003122	ENSCAPP00000006795	annotation not available	annotation not available	0.617
ENSCAPP00000003122	EPOR	ENSCAPP00000003122	ENSCAPP00000008397	annotation not available	Erythropoietin receptor.	0.722
ENSCAPP00000003122	ITGB1	ENSCAPP00000003122	ENSCAPP00000000311	annotation not available	Integrin subunit beta 1.	0.827
ENSCAPP00000003122	NISCH	ENSCAPP00000003122	ENSCAPP00000002058	annotation not available	Nischarin.	0.576
ENSCAPP00000003122	PIK3R1	ENSCAPP00000003122	ENSCAPP00000016974	annotation not available	Phosphoinositide-3-kinase regulatory subunit 1.	0.992
ENSCAPP00000003122	RND1	ENSCAPP00000003122	ENSCAPP00000002218	annotation not available	Rho family GTPase 1.	0.617
ENSCAPP00000003122	RND2	ENSCAPP00000003122	ENSCAPP00000006470	annotation not available	Rho family GTPase 2.	0.604
ENSCAPP00000006795	ENSCAPP00000003122	ENSCAPP00000006795	ENSCAPP00000003122	annotation not available	annotation not available	0.617
ENSCAPP00000006795	LIMK1	ENSCAPP00000006795	ENSCAPP00000010609	annotation not available	LIM domain kinase 1.	0.432
ENSCAPP00000006795	MAPK3	ENSCAPP00000006795	ENSCAPP00000016376	annotation not available	Mitogen-activated protein kinase 3.	0.519
ENSCAPP00000006795	NISCH	ENSCAPP00000006795	ENSCAPP00000002058	annotation not available	Nischarin.	0.625
ENSCAPP00000006795	PIK3R1	ENSCAPP00000006795	ENSCAPP00000016974	annotation not available	Phosphoinositide-3-kinase regulatory subunit 1.	0.617
EPOR	ENSCAPP00000003122	ENSCAPP00000008397	ENSCAPP00000003122	Erythropoietin receptor.	annotation not available	0.722
EPOR	LIMK1	ENSCAPP00000008397	ENSCAPP00000010609	Erythropoietin receptor.	LIM domain kinase 1.	0.462
EPOR	NISCH	ENSCAPP00000008397	ENSCAPP00000002058	Erythropoietin receptor.	Nischarin.	0.551
EPOR	PIK3R1	ENSCAPP00000008397	ENSCAPP00000016974	Erythropoietin receptor.	Phosphoinositide-3-kinase regulatory subunit 1.	0.856
ITGB1	ENSCAPP00000003122	ENSCAPP00000000311	ENSCAPP00000003122	Integrin subunit beta 1.	annotation not available	0.827
ITGB1	MAPK3	ENSCAPP00000000311	ENSCAPP00000016376	Integrin subunit beta 1.	Mitogen-activated protein kinase 3.	0.539
ITGB1	NISCH	ENSCAPP00000000311	ENSCAPP00000002058	Integrin subunit beta 1.	Nischarin.	0.599
ITGB1	PIK3R1	ENSCAPP00000000311	ENSCAPP00000016974	Integrin subunit beta 1.	Phosphoinositide-3-kinase regulatory subunit 1.	0.930