Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NISCHNischarin. (1428 aa)    
Predicted Functional Partners:
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
    
  0.957
ENSCAPP00000003122
annotation not available
    
  0.874
CNKSR3
CNKSR family member 3.
    
   0.840
ENSCAPP00000015345
annotation not available
    
  0.829
ENSCAPP00000003676
annotation not available
      
 0.754
EPOR
Erythropoietin receptor.
      
 0.752
ITGB1
Integrin subunit beta 1.
     
 0.750
MAPK3
Mitogen-activated protein kinase 3.
    
 
 0.728
ORC5
Origin recognition complex subunit 5.
     
  0.698
ORC2
Origin recognition complex subunit 2.
     
  0.698
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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