STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B3GAT1Beta-1,3-glucuronyltransferase 1. (347 aa)    
Predicted Functional Partners:
CHST10
Carbohydrate sulfotransferase 10.
     
 0.949
B4GALT2
Beta-1,4-galactosyltransferase 2.
   
 
 0.929
B4GALT3
Beta-1,4-galactosyltransferase 3.
   
 
 0.929
B4GALT1
Beta-1,4-galactosyltransferase 1.
   
 
 0.929
EXTL3
Exostosin like glycosyltransferase 3.
     
 0.915
INVS
Inversin.
      
 0.906
ENSCAPP00000013704
annotation not available
      
 0.892
SHROOM3
Shroom family member 3.
      
 0.882
ENSCAPP00000010271
annotation not available
      
 0.859
EXTL2
Exostosin like glycosyltransferase 2.
     
 0.835
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.