Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LGALS4Galectin 4. (322 aa)    
Predicted Functional Partners:
PDZK1IP1
PDZK1 interacting protein 1.
   
  
 0.698
HPD
4-hydroxyphenylpyruvate dioxygenase.
      
 0.687
CHD7
Chromodomain helicase DNA binding protein 7.
      
 0.576
GALK1
Galactokinase 1.
      
 0.575
ENSCAPP00000003162
annotation not available
      
 0.572
ENSCAPP00000010726
annotation not available
      
 0.572
GALM
Galactose mutarotase.
      
 0.572
TBP
TATA-box binding protein.
   
  
 0.571
ENSCAPP00000016666
annotation not available
   
   0.571
SHKBP1
SH3KBP1 binding protein 1.
      
 0.561
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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