Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PODNPodocan. (613 aa)    
Predicted Functional Partners:
LRR1
Leucine rich repeat protein 1.
      
 0.788
ENSCAPP00000001121
annotation not available
    
 0.704
RAE1
Ribonucleic acid export 1.
    
 0.700
WHRN
Whirlin.
    
 0.651
RAI2
Retinoic acid induced 2.
    
 0.651
EPYC
Epiphycan.
      
 0.582
NTNG1
Netrin G1.
    
 0.580
VSIG2
V-set and immunoglobulin domain containing 2.
      
 0.580
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.574
ENSCAPP00000014343
annotation not available
    
 0.574
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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