Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDHR2Cadherin related family member 2. (1277 aa)    
Predicted Functional Partners:
CDHR5
Cadherin related family member 5.
   
 0.999
PCDH15
Protocadherin related 15.
   
 0.973
CDH1
Cadherin 1.
    
 0.972
CDH3
Cadherin 3.
    
 0.962
CDH12
Cadherin 12.
    
  0.959
JUP
Junction plakoglobin.
    
 0.957
CTNNB1
Catenin beta 1.
    
 0.956
USH1C
USH1 protein network component harmonin.
   
 
 0.952
CDH4
Cadherin 4.
    
  0.951
ENSCAPP00000010223
annotation not available
    
  0.951
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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