STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPICSpi-C transcription factor. (261 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
     
 0.613
ENSCAPP00000000033
annotation not available
    
 0.516
RUNX2
RUNX family transcription factor 2.
    
 0.516
RUNX3
RUNX family transcription factor 3.
    
 0.516
CREBBP
CREB binding protein.
    
 0.496
EP300
E1A binding protein p300.
    
 0.496
GATA3
GATA binding protein 3.
   
 0.471
C5orf30
Chromosome 5 open reading frame 30.
    
   0.471
GATA1
GATA binding protein 1.
    
 0.466
ENSCAPP00000003821
annotation not available
    
 0.458
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.