STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTNVitronectin. (478 aa)    
Predicted Functional Partners:
SERPINE1
Serpin family E member 1.
   
 0.997
ENSCAPP00000000830
annotation not available
    
 0.996
PLAU
Plasminogen activator, urokinase.
    
 0.986
PLAT
Plasminogen activator, tissue type.
    
 0.971
ENSCAPP00000016185
annotation not available
    
 0.968
ITGB1
Integrin subunit beta 1.
    
 0.965
ENSCAPP00000003973
annotation not available
    
 0.965
ITGA2B
Integrin subunit alpha 2b.
    
 0.964
ITGAV
Integrin subunit alpha V.
    
 0.964
ITGA8
Integrin subunit alpha 8.
    
 0.962
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.