STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIL4Peptidylprolyl isomerase like 4. (409 aa)    
Predicted Functional Partners:
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.991
DHX38
DEAH-box helicase 38.
   
  0.986
DHX16
DEAH-box helicase 16.
   
 0.985
ENSCAPP00000006491
annotation not available
    
 0.985
DHX40
DEAH-box helicase 40.
  
 0.982
GPKOW
G-patch domain and KOW motifs.
   
 0.970
USP7
Ubiquitin specific peptidase 7.
    
 0.965
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.953
SF3A1
Splicing factor 3a subunit 1.
   
 0.943
CCDC12
Coiled-coil domain containing 12.
    
  0.942
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.