STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC41A1Solute carrier family 41 member 1. (490 aa)    
Predicted Functional Partners:
SLC41A2
Solute carrier family 41 member 2.
   
 
  0.922
RAB29
RAB29, member RAS oncogene family.
      
 0.746
ENSCAPP00000016601
annotation not available
      
 0.746
NUCKS1
Nuclear casein kinase and cyclin dependent kinase substrate 1.
      
 0.741
MRS2
Magnesium transporter MRS2.
      
 0.686
CLDN16
Claudin 16.
      
 0.653
TRPM6
Transient receptor potential cation channel subfamily M member 6.
      
 0.619
MMGT1
Membrane magnesium transporter 1.
      
 0.610
LYPD3
LY6/PLAUR domain containing 3.
    
   0.593
SLC45A3
Solute carrier family 45 member 3.
      
 0.572
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.