Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NELFBNegative elongation factor complex member B. (425 aa)    
Predicted Functional Partners:
NELFCD
Negative elongation factor complex member C/D.
   
 0.999
NELFE
Negative elongation factor complex member E.
    
 0.999
NELFA
Negative elongation factor complex member A.
   
 0.999
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.989
ENSCAPP00000017855
annotation not available
    
 0.977
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
   
 0.972
C1GALT1
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
   
 0.949
ENSCAPP00000011458
annotation not available
    
  0.930
POLR2I
RNA polymerase II subunit I.
    
  0.918
POLR2K
RNA polymerase II subunit K.
    
  0.917
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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