STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NELFBNegative elongation factor complex member B. (425 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.999
NELFCD
Negative elongation factor complex member C/D.
   
 0.997
NELFE
Negative elongation factor complex member E.
    
 0.997
NELFA
Negative elongation factor complex member A.
   
 0.997
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
   
 0.995
C1GALT1
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
   
 0.974
POLR2E
RNA polymerase II subunit E.
    
 0.968
POLR2C
RNA polymerase II subunit C.
    
 0.963
POLR2I
RNA polymerase II subunit I.
    
 0.961
ELL
Elongation factor for RNA polymerase II.
     
 0.944
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.