ENSCAPP00000002101 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000002101

annotation not available (427 aa)

Predicted Functional Partners:

ASS1

0.997

OAT

0.993

ADSL

0.963

CS

0.934

SDHB

0.925

NOS3

0.923

NOS2

0.923

ARG2

0.920

ARG1

0.920

AZIN2

0.911

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADSL	ARG1	ENSCAPP00000016522	ENSCAPP00000018677	Adenylosuccinate lyase.	Arginase 1.	0.704
ADSL	ARG2	ENSCAPP00000016522	ENSCAPP00000004367	Adenylosuccinate lyase.	Arginase 2.	0.704
ADSL	ASS1	ENSCAPP00000016522	ENSCAPP00000016380	Adenylosuccinate lyase.	Argininosuccinate synthase 1.	0.728
ADSL	CS	ENSCAPP00000016522	ENSCAPP00000018536	Adenylosuccinate lyase.	Citrate synthase.	0.842
ADSL	ENSCAPP00000002101	ENSCAPP00000016522	ENSCAPP00000002101	Adenylosuccinate lyase.	annotation not available	0.963
ADSL	SDHB	ENSCAPP00000016522	ENSCAPP00000014177	Adenylosuccinate lyase.	Succinate dehydrogenase complex iron sulfur subunit B.	0.746
ARG1	ADSL	ENSCAPP00000018677	ENSCAPP00000016522	Arginase 1.	Adenylosuccinate lyase.	0.704
ARG1	ARG2	ENSCAPP00000018677	ENSCAPP00000004367	Arginase 1.	Arginase 2.	0.928
ARG1	ASS1	ENSCAPP00000018677	ENSCAPP00000016380	Arginase 1.	Argininosuccinate synthase 1.	0.801
ARG1	AZIN2	ENSCAPP00000018677	ENSCAPP00000007975	Arginase 1.	Antizyme inhibitor 2.	0.941
ARG1	ENSCAPP00000002101	ENSCAPP00000018677	ENSCAPP00000002101	Arginase 1.	annotation not available	0.920
ARG1	NOS2	ENSCAPP00000018677	ENSCAPP00000015906	Arginase 1.	Nitric oxide synthase 2.	0.956
ARG1	NOS3	ENSCAPP00000018677	ENSCAPP00000003761	Arginase 1.	Nitric oxide synthase 3.	0.929
ARG1	OAT	ENSCAPP00000018677	ENSCAPP00000005122	Arginase 1.	Ornithine aminotransferase.	0.988
ARG2	ADSL	ENSCAPP00000004367	ENSCAPP00000016522	Arginase 2.	Adenylosuccinate lyase.	0.704
ARG2	ARG1	ENSCAPP00000004367	ENSCAPP00000018677	Arginase 2.	Arginase 1.	0.928
ARG2	ASS1	ENSCAPP00000004367	ENSCAPP00000016380	Arginase 2.	Argininosuccinate synthase 1.	0.801
ARG2	AZIN2	ENSCAPP00000004367	ENSCAPP00000007975	Arginase 2.	Antizyme inhibitor 2.	0.945
ARG2	ENSCAPP00000002101	ENSCAPP00000004367	ENSCAPP00000002101	Arginase 2.	annotation not available	0.920
ARG2	NOS2	ENSCAPP00000004367	ENSCAPP00000015906	Arginase 2.	Nitric oxide synthase 2.	0.937