STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACKR4Atypical chemokine receptor 4. (350 aa)    
Predicted Functional Partners:
CCL21
C-C motif chemokine ligand 21.
    
 0.992
ENSCAPP00000009827
annotation not available
    
 0.991
CCL19
C-C motif chemokine ligand 19.
    
 0.973
ENSCAPP00000008292
annotation not available
   
 0.944
CCR9
C-C motif chemokine receptor 9.
    
  0.911
CCR7
C-C motif chemokine receptor 7.
    
  0.911
CXCR6
C-X-C motif chemokine receptor 6.
    
  0.846
ENSCAPP00000004617
annotation not available
    
 0.821
LYVE1
Lymphatic vessel endothelial hyaluronan receptor 1.
    
 
 0.775
CCL5
C-C motif chemokine ligand 5.
    
 0.746
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.