Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002113annotation not available (390 aa)    
Predicted Functional Partners:
FAM151B
Family with sequence similarity 151 member B.
    
 
 0.929
CWC25
CWC25 spliceosome associated protein homolog.
   
  0.748
ENSCAPP00000008997
annotation not available
   
   0.690
CALHM2
Calcium homeostasis modulator family member 2.
   
    0.684
ENSCAPP00000013050
annotation not available
   
    0.684
LIX1
Limb and CNS expressed 1.
   
    0.678
LIX1L
Limb and CNS expressed 1 like.
   
    0.678
TIAM2
TIAM Rac1 associated GEF 2.
    
 
 0.674
TIAM1
TIAM Rac1 associated GEF 1.
    
 
 0.674
NTNG1
Netrin G1.
    
 0.665
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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