Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP10Ubiquitin specific peptidase 10. (708 aa)    
Predicted Functional Partners:
CFTR
CF transmembrane conductance regulator.
    
 0.996
G3BP1
G3BP stress granule assembly factor 1.
   
 0.995
G3BP2
G3BP stress granule assembly factor 2.
   
 0.991
TP53
Tumor protein p53.
    
 0.986
SNAI1
Snail family transcriptional repressor 1.
    
   0.958
ENSCAPP00000016912
annotation not available
    
 
 0.958
ENSCAPP00000017766
annotation not available
   
   0.958
ENSCAPP00000012690
annotation not available
    
 0.935
PCNA
Proliferating cell nuclear antigen.
    
 0.929
CAPRIN1
Cell cycle associated protein 1.
   
 
 0.921
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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