STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP10Ubiquitin specific peptidase 10. (708 aa)    
Predicted Functional Partners:
G3BP1
G3BP stress granule assembly factor 1.
   
 0.972
G3BP2
G3BP stress granule assembly factor 2.
   
 0.971
NELFE
Negative elongation factor complex member E.
    
 0.904
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
  0.874
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
  0.865
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
  0.865
WDR61
WD repeat domain 61.
    
  0.863
NELFA
Negative elongation factor complex member A.
   
 
  0.857
CFTR
CF transmembrane conductance regulator.
    
 0.856
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
  0.854
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.