Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHM3Pleckstrin homology domain containing M3. (728 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
  0.862
ENSCAPP00000010142
annotation not available
     
 0.856
GABARAPL2
GABA type A receptor associated protein like 2.
     
 0.781
ENSCAPP00000017351
annotation not available
     
 0.781
DAGLA
Diacylglycerol lipase alpha.
      
 0.583
CCNYL1
Cyclin Y like 1.
      
 0.568
CCNY
Cyclin Y.
      
 0.568
ENSCAPP00000017408
annotation not available
      
 0.567
SLC7A13
Solute carrier family 7 member 13.
      
 0.564
LRRCC1
Leucine rich repeat and coiled-coil centrosomal protein 1.
      
 0.563
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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