Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002126annotation not available (449 aa)    
Predicted Functional Partners:
AMPH
Amphiphysin.
   
 0.998
DNM1
Dynamin 1.
   
  0.998
ENSCAPP00000006771
annotation not available
 
 
0.997
BIN1
Bridging integrator 1.
    
 0.996
ENSCAPP00000016359
annotation not available
   
  0.996
CTTN
Cortactin.
    
 0.995
GAK
Cyclin G associated kinase.
   
 0.986
SNX9
Sorting nexin 9.
    
 0.985
HCLS1
Hematopoietic cell-specific Lyn substrate 1.
   
 0.968
GRB2
Growth factor receptor bound protein 2.
    
 
 0.961
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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