Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C7orf25Chromosome 7 open reading frame 25. (421 aa)    
Predicted Functional Partners:
PSMA2
Proteasome 20S subunit alpha 2.
 
    
 0.806
VOPP1
VOPP1 WW domain binding protein.
      
 0.673
BLVRA
Biliverdin reductase A.
      
 0.593
ENSCAPP00000000065
annotation not available
      
 0.578
ENSCAPP00000009335
annotation not available
      
 0.571
NRBF2
Nuclear receptor binding factor 2.
      
 0.569
CCDC155
Coiled-coil domain containing 155.
      
 0.568
LANCL2
LanC like 2.
      
 0.567
DPCD
Deleted in primary ciliary dyskinesia homolog (mouse).
      
 0.565
ENSCAPP00000010033
annotation not available
      
 0.556
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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