STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002134annotation not available (91 aa)    
Predicted Functional Partners:
ENSCAPP00000013337
annotation not available
   
   0.802
SEC61B
SEC61 translocon beta subunit.
   
   0.694
TMEM147
Transmembrane protein 147.
   
   0.692
NCLN
Nicalin.
   
   0.691
ENSCAPP00000002863
annotation not available
    
   0.679
WDR83OS
WD repeat domain 83 opposite strand.
   
   0.679
RPL8
Ribosomal protein L8.
   
   0.657
RPL19
Ribosomal protein L19.
   
   0.657
ENSCAPP00000018483
annotation not available
   
   0.657
RPL5
Ribosomal protein L5.
   
   0.655
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.