Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF202Zinc finger protein 202. (594 aa)    
Predicted Functional Partners:
ZMYM2
Zinc finger MYM-type containing 2.
    
 0.948
ZMYM3
Zinc finger MYM-type containing 3.
    
 0.901
LMO4
LIM domain only 4.
    
   0.833
ENSCAPP00000013036
annotation not available
    
 0.647
ZMYM4
Zinc finger MYM-type containing 4.
    
  0.627
KLHL25
Kelch like family member 25.
    
 0.616
ENSCAPP00000011081
annotation not available
    
 
 0.600
SIAH1
Siah E3 ubiquitin protein ligase 1.
    
 
 0.566
LCAT
Lecithin-cholesterol acyltransferase.
     
 0.564
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.556
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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