Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC42Coiled-coil domain containing 42. (316 aa)    
Predicted Functional Partners:
ENSCAPP00000006959
annotation not available
   
 
 0.977
CCDC40
Coiled-coil domain containing 40.
    
 
 0.957
CCDC113
Coiled-coil domain containing 113.
  
 
 0.937
CCDC38
Coiled-coil domain containing 38.
    
 
 0.933
RSPH1
Radial spoke head component 1.
   
 
 0.924
ARMC4
Armadillo repeat containing 4.
   
 
 0.922
IQCD
IQ motif containing D.
   
 
 0.918
CFAP44
Cilia and flagella associated protein 44.
    
 
 0.908
ENSCAPP00000011153
annotation not available
    
 
 0.906
MORN3
MORN repeat containing 3.
   
 
 0.901
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.