STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD13CAnkyrin repeat domain 13C. (423 aa)    
Predicted Functional Partners:
DLK1
Delta like non-canonical Notch ligand 1.
    
   0.825
ENSCAPP00000010270
annotation not available
   
  
 0.613
RPL14
Ribosomal protein L14.
      
 0.549
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
      
 0.546
ENSCAPP00000015032
annotation not available
      
 0.541
ENSCAPP00000018502
annotation not available
      
 0.521
RTP2
Receptor transporter protein 2.
      
 0.514
CSNK1A1
Casein kinase 1 alpha 1.
     
  0.457
RTP1
Receptor transporter protein 1.
      
 0.454
ENSCAPP00000006028
annotation not available
      
 0.454
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.