GRAMD1B protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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textmining

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co-expression

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[Homology]

Score

GRAMD1B

GRAM domain containing 1B. (627 aa)

Predicted Functional Partners:

HTR2C

0.974

GRAMD1C

0.956

GRAMD2B

0.955

ENSCAPP00000015451

0.930

ENSCAPP00000011394

0.701

TBRG1

0.674

SCN2B

0.638

GARNL3

0.611

SCN4B

0.595

ENSCAPP00000001121

0.563

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000001121	GRAMD1B	ENSCAPP00000001121	ENSCAPP00000002142	annotation not available	GRAM domain containing 1B.	0.563
ENSCAPP00000011394	GARNL3	ENSCAPP00000011394	ENSCAPP00000016914	annotation not available	GTPase activating Rap/RanGAP domain like 3.	0.681
ENSCAPP00000011394	GRAMD1B	ENSCAPP00000011394	ENSCAPP00000002142	annotation not available	GRAM domain containing 1B.	0.701
ENSCAPP00000011394	TBRG1	ENSCAPP00000011394	ENSCAPP00000004591	annotation not available	Transforming growth factor beta regulator 1.	0.689
ENSCAPP00000015451	GRAMD1B	ENSCAPP00000015451	ENSCAPP00000002142	annotation not available	GRAM domain containing 1B.	0.930
ENSCAPP00000015451	GRAMD1C	ENSCAPP00000015451	ENSCAPP00000015904	annotation not available	GRAM domain containing 1C.	0.574
ENSCAPP00000015451	GRAMD2B	ENSCAPP00000015451	ENSCAPP00000014907	annotation not available	GRAM domain containing 2B.	0.765
ENSCAPP00000015451	SCN2B	ENSCAPP00000015451	ENSCAPP00000006539	annotation not available	Sodium voltage-gated channel beta subunit 2.	0.638
ENSCAPP00000015451	SCN4B	ENSCAPP00000015451	ENSCAPP00000010360	annotation not available	Sodium voltage-gated channel beta subunit 4.	0.847
GARNL3	ENSCAPP00000011394	ENSCAPP00000016914	ENSCAPP00000011394	GTPase activating Rap/RanGAP domain like 3.	annotation not available	0.681
GARNL3	GRAMD1B	ENSCAPP00000016914	ENSCAPP00000002142	GTPase activating Rap/RanGAP domain like 3.	GRAM domain containing 1B.	0.611
GARNL3	TBRG1	ENSCAPP00000016914	ENSCAPP00000004591	GTPase activating Rap/RanGAP domain like 3.	Transforming growth factor beta regulator 1.	0.676
GRAMD1B	ENSCAPP00000001121	ENSCAPP00000002142	ENSCAPP00000001121	GRAM domain containing 1B.	annotation not available	0.563
GRAMD1B	ENSCAPP00000011394	ENSCAPP00000002142	ENSCAPP00000011394	GRAM domain containing 1B.	annotation not available	0.701
GRAMD1B	ENSCAPP00000015451	ENSCAPP00000002142	ENSCAPP00000015451	GRAM domain containing 1B.	annotation not available	0.930
GRAMD1B	GARNL3	ENSCAPP00000002142	ENSCAPP00000016914	GRAM domain containing 1B.	GTPase activating Rap/RanGAP domain like 3.	0.611
GRAMD1B	GRAMD1C	ENSCAPP00000002142	ENSCAPP00000015904	GRAM domain containing 1B.	GRAM domain containing 1C.	0.956
GRAMD1B	GRAMD2B	ENSCAPP00000002142	ENSCAPP00000014907	GRAM domain containing 1B.	GRAM domain containing 2B.	0.955
GRAMD1B	HTR2C	ENSCAPP00000002142	ENSCAPP00000004038	GRAM domain containing 1B.	5-hydroxytryptamine receptor 2C.	0.974
GRAMD1B	SCN2B	ENSCAPP00000002142	ENSCAPP00000006539	GRAM domain containing 1B.	Sodium voltage-gated channel beta subunit 2.	0.638