Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002143annotation not available (109 aa)    
Predicted Functional Partners:
SUMO1
Small ubiquitin like modifier 1.
    
 0.965
ENSCAPP00000002246
annotation not available
    
 0.917
ENSCAPP00000014899
annotation not available
    
 0.917
NBN
Nibrin.
    
  0.914
ENSCAPP00000005433
annotation not available
    
  0.913
HMGB1
High mobility group box 1.
    
  0.846
ENSCAPP00000009768
annotation not available
    
  0.846
HMGB4
High mobility group box 4.
    
  0.843
RANBP2
RAN binding protein 2.
    
 0.837
ENSCAPP00000013457
annotation not available
    
 0.754
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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