STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC6Zinc finger DHHC-type containing 6. (355 aa)    
Predicted Functional Partners:
OGFOD3
2-oxoglutarate and iron dependent oxygenase domain containing 3.
      
 0.949
TMEM161A
Transmembrane protein 161A.
      
 0.949
ENSCAPP00000011055
annotation not available
      
 0.897
VRK2
VRK serine/threonine kinase 2.
      
 0.878
DGKE
Diacylglycerol kinase epsilon.
      
 0.756
GPAT4
Glycerol-3-phosphate acyltransferase 4.
      
 0.750
ENSCAPP00000018546
annotation not available
    
 
 0.713
TMEM209
Transmembrane protein 209.
      
 0.691
CCDC186
Coiled-coil domain containing 186.
      
 0.683
HSD11B1
Hydroxysteroid 11-beta dehydrogenase 1.
      
 0.678
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.