Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C14orf119Chromosome 14 open reading frame 119. (142 aa)    
Predicted Functional Partners:
STN1
STN1 subunit of CST complex.
    
 
 0.840
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.735
ENSCAPP00000007661
annotation not available
    
 0.640
INTS13
Integrator complex subunit 13.
    
 0.616
WDR90
WD repeat domain 90.
    
  0.613
INTS1
Integrator complex subunit 1.
    
 0.611
BBS7
Bardet-Biedl syndrome 7.
    
 0.610
ENSCAPP00000016519
annotation not available
   
 
 0.609
RUVBL2
RuvB like AAA ATPase 2.
    
 0.605
NUDT12
Nudix hydrolase 12.
   
 0.604
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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