Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002153annotation not available (748 aa)    
Predicted Functional Partners:
CHMP4C
Charged multivesicular body protein 4C.
    
 0.997
CHMP4B
Charged multivesicular body protein 4B.
    
 0.997
ENSCAPP00000005302
annotation not available
    
 0.996
TSG101
Tumor susceptibility 101.
   
 0.991
CEP55
Centrosomal protein 55.
    
 
 0.981
SDCBP
Syndecan binding protein.
    
 0.971
SH3GL1
SH3 domain containing GRB2 like 1, endophilin A2.
   
 
 0.968
ENSCAPP00000005376
annotation not available
    
 
 0.959
EGFR
Epidermal growth factor receptor.
    
 
 0.959
MVB12A
Multivesicular body subunit 12A.
     
 0.949
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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