STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002153annotation not available (748 aa)    
Predicted Functional Partners:
CHMP4B
Charged multivesicular body protein 4B.
    
 0.989
CHMP4C
Charged multivesicular body protein 4C.
    
 0.988
ENSCAPP00000005302
annotation not available
    
 0.984
TSG101
Tumor susceptibility 101.
   
 0.953
ENSCAPP00000015929
annotation not available
    
 0.948
SDCBP
Syndecan binding protein.
    
 0.892
CEP55
Centrosomal protein 55.
    
 
 0.890
VPS4B
Vacuolar protein sorting 4 homolog B.
   
 0.878
MVB12B
Multivesicular body subunit 12B.
     
 0.849
ENSCAPP00000017217
annotation not available
   
 0.843
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.